.. DO NOT EDIT.
.. THIS FILE WAS AUTOMATICALLY GENERATED BY SPHINX-GALLERY.
.. TO MAKE CHANGES, EDIT THE SOURCE PYTHON FILE:
.. "auto_examples/segmentation/plot_peak_local_max.py"
.. LINE NUMBERS ARE GIVEN BELOW.

.. only:: html

    .. note::
        :class: sphx-glr-download-link-note

        :ref:`Go to the end <sphx_glr_download_auto_examples_segmentation_plot_peak_local_max.py>`
        to download the full example code or to run this example in your browser via Binder

.. rst-class:: sphx-glr-example-title

.. _sphx_glr_auto_examples_segmentation_plot_peak_local_max.py:


====================
Finding local maxima
====================

The ``peak_local_max`` function returns the coordinates of local peaks (maxima)
in an image. Internally, a maximum filter is used for finding local maxima. This
operation dilates the original image and merges neighboring local maxima closer
than the size of the dilation. Locations where the original image is equal to the
dilated image are returned as local maxima.

.. GENERATED FROM PYTHON SOURCE LINES 13-47



.. image-sg:: /auto_examples/segmentation/images/sphx_glr_plot_peak_local_max_001.png
   :alt: Original, Maximum filter, Peak local max
   :srcset: /auto_examples/segmentation/images/sphx_glr_plot_peak_local_max_001.png
   :class: sphx-glr-single-img





.. code-block:: default

    from scipy import ndimage as ndi
    import matplotlib.pyplot as plt
    from skimage.feature import peak_local_max
    from skimage import data, img_as_float

    im = img_as_float(data.coins())

    # image_max is the dilation of im with a 20*20 structuring element
    # It is used within peak_local_max function
    image_max = ndi.maximum_filter(im, size=20, mode='constant')

    # Comparison between image_max and im to find the coordinates of local maxima
    coordinates = peak_local_max(im, min_distance=20)

    # display results
    fig, axes = plt.subplots(1, 3, figsize=(8, 3), sharex=True, sharey=True)
    ax = axes.ravel()
    ax[0].imshow(im, cmap=plt.cm.gray)
    ax[0].axis('off')
    ax[0].set_title('Original')

    ax[1].imshow(image_max, cmap=plt.cm.gray)
    ax[1].axis('off')
    ax[1].set_title('Maximum filter')

    ax[2].imshow(im, cmap=plt.cm.gray)
    ax[2].autoscale(False)
    ax[2].plot(coordinates[:, 1], coordinates[:, 0], 'r.')
    ax[2].axis('off')
    ax[2].set_title('Peak local max')

    fig.tight_layout()

    plt.show()


.. rst-class:: sphx-glr-timing

   **Total running time of the script:** (0 minutes 0.511 seconds)


.. _sphx_glr_download_auto_examples_segmentation_plot_peak_local_max.py:

.. only:: html

  .. container:: sphx-glr-footer sphx-glr-footer-example


    .. container:: binder-badge

      .. image:: images/binder_badge_logo.svg
        :target: https://mybinder.org/v2/gh/scikit-image/scikit-image/v0.22.x?filepath=notebooks/auto_examples/segmentation/plot_peak_local_max.ipynb
        :alt: Launch binder
        :width: 150 px



    .. container:: sphx-glr-download sphx-glr-download-python

      :download:`Download Python source code: plot_peak_local_max.py <plot_peak_local_max.py>`

    .. container:: sphx-glr-download sphx-glr-download-jupyter

      :download:`Download Jupyter notebook: plot_peak_local_max.ipynb <plot_peak_local_max.ipynb>`


.. only:: html

 .. rst-class:: sphx-glr-signature

    `Gallery generated by Sphinx-Gallery <https://sphinx-gallery.github.io>`_